This week in MathOnco 156
Extinction, multi-scale, T-cell movement, co-culture competition, mechanical stress in tumors.
“This week in Mathematical Oncology” — Newsletter
Apr. 1, 2021
>jeffrey.west@moffitt.org
>
From the editor:
Summary of contents:
- Stochastic- extinction- in CAR-T therapy
- Breast cancer cell line- competition
- A- review- on the treatment of metastases
- Multi-scale- models- of tumor oxygenation
- A nice- preprint- on T-cells, along with a neat- movie of T-cells- in action on Twitter.
Enjoy,
-Jeffrey West
- The roles of T cell competition and stochastic extinction events in chimeric antigen receptor T cell therapy 
 Gregory J. Kimmel, Frederick L. Locke, Philipp M. Altrock
- Predicting the results of competition between two breast cancer lines grown in 3-D spheroid culture 
 Marisbel Rodriguez Messan, Mehdi Damaghi, Audrey Freischel, Yan Miao, Joel Brown, Robert Gillies, Dorothy Wallace
- Breast tumours maintain a reservoir of subclonal diversity during expansion 
 Darlan C. Minussi, Michael D. Nicholson, Hanghui Ye, Alexander Davis, …, Funda Meric-Bernstam, Peter Van Loo, Franziska Michor, Nicholas E. Navin
- Emerging strategies for treating metastasis 
 Mark Esposito, Shridar Ganesan, Yibin Kang
- A novel 3D atomistic-continuum cancer invasion model: in silico simulations of an in vitro organotypic invasion assay 
 Linnea C. Franssen, Nikolaos Sfakianakis, Mark A.J. Chaplain
- Mechanical influences on in silico tumor evolution 
 Jakob Rosenbauer, Marco Berghoff, James A. Glazier, Alexander Schug
- A Multiscale Immuno-Oncology on-Chip System (MIOCS) establishes that collective T cell behaviors govern tumor regression 
 Gustave Ronteix, Shreyansh Jain, Christelle Angely, Marine Cazaux, Roxana Khazen, Philippe Bousso, Charles N. Baroud
- Immune checkpoint therapy modeling of PD-1/PD-L1 blockades reveals subtle difference in their response dynamics and potential synergy in combination 
 Kamran Kaveh, Feng Fu
- Bridging cell-scale simulations and radiologic images to explain short-time intratumoral oxygen fluctuations 
 Jessica L. Kingsley, James R. Costello, Natarajan Raghunand, Katarzyna A. Rejniak
- Evaluating glioma growth predictions as a forward ranking problem 
 Karin A. van Garderen, Sebastian R. van der Voort, Maarten M.J. Wijnenga, Fatih Incekara, Georgios Kapsas, Renske Gahrmann, Ahmad Alafandi, Marion Smits, Stefan Klein
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- Networks in Cancer: From Symmetry Breaking to Targeted Therapy 
 Guest Editor: Cristian Axenie, Roman Bauer, María Rodríguez Martínez
- Understanding the Evolutionary Dynamics and Ecology of Cancer in Treatment Resistance 
 Guest Editor: David Basanta
- Mathematical Models of Cellular Immunotherapies in Cancer 
 Guest Editors: V. Pérez-García, L. de Pillis, P. Altrock, R. Rockne
- From Ecology to Cancer Biology and Back Again 
 Guest Editors: Fred Adler, Sarah Amend, Chris Whelan
- Frontiers in quantitative cancer modeling 
 Guest Editors: Mohit Kumar Jolly, Heiko Enderling
- NEW: Research Fellow in Computational Systems Biology Cancer Research (Simon Mitchell) 
- PhD student - Measuring cancer evolution in a changing tumour microenvironment (Xiaowei Jiang) 
- Postdoctoral Scholar - Genetics and Genome Sciences (Christopher McFarland) 
- Postdoc on colorectal cancer evolution or cancer immunotherapy (Ivana Bozic) 
- PhD student in modeling evolution and ecology of cancer (Rob Noble) 
- Postdoc on cancer/immune modeling and machine learning (Eduardo Sontag) 
- Early Stage Researcher: Evolutionary therapy in ovarian cancer (Ben Werner) 
- Mathematical Modeling Expert in Oncology Translational Science (Boehringer Ingelheim) 
- Research Associate - Biostatistician (University of Manchester) 
- Postdoctoral Fellow in Cancer Resistance Modeling, Pfizer (Blerta Shtylla) 
- Principal Scientist – Oncology PK/PD Modelling (Boehringer Ingelheim) 
- Postdoctoral Research Position in Computational Immunology (Sylvain Cussat-Blanc) 
- Systems Biology Modeler Positions in Biopharma Consulting Company (Helen Moore) 
- Computational Approaches to Breast Cancer Evolution - Postdoc (Marc Ryser) 
- Math/statistical models of stem cell lineage dynamics and cancer genomics - Postdoc (Adam MacLean) 
- Postdoctoral Research Position in Computational Oncology (Tom Yankeelov) 
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